Journal of Cheminformatics | Article collections

Submit a manuscript Register Contact us

Explore journal

Advertisement

Articles

RDF technologies in chemistry

Edited by: Dr Martin Paul Braendle, Dr Egon Willighagen

Collection published: 13 May 2011

Last updated: 19 May 2011

The American Chemical Society (ACS) Division of Chemical Information (CINF) invited scientists from around the world to present their use of RDF technologies in chemistry on 22nd-23rd August 2010 at the 240th ACS National Meeting in Boston, USA. During three half-day sessions, the speakers demonstrated a mix of smaller and larger initiatives where Resource Description Framework (RDF) technologies are used in cheminformatics and bioinformatics as Open Standards for data exchange, common languages (ontologies), and problem solving. This Thematic Series introduces work presented at that meeting, showing the current advances in cheminformatics using these RDF technologies.

Article processing charges for this Thematic Series have been partially funded by Pfizer, Inc. Pfizer, Inc. has had no input into the content of the publication or the articles themselves. All articles in the series have been independently prepared by the authors and have been subject to the journal's standard peer review process.

		Methodology Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:20 (19 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Preliminary communication Linked open drug data for pharmaceutical research and development Matthias Samwald, Anja Jentzsch, Christopher Bouton, Claus Kallesøe, Egon Willighagen, Janos Hajagos, M Marshall, Eric Prud'hommeaux, Oktie Hassanzadeh, Elgar Pichler, Susie Stephens Journal of Cheminformatics 2011, 3:19 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Software AMBIT RESTful web services: an implementation of the OpenTox application programming interface Nina Jeliazkova, Vedrin Jeliazkov Journal of Cheminformatics 2011, 3:18 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Research article ChemicalTagger: A tool for semantic text-mining in chemistry Lezan Hawizy, David M Jessop, Nico Adams, Peter Murray-Rust Journal of Cheminformatics 2011, 3:17 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
		Methodology Semantic Web integration of Cheminformatics resources with the SADI framework Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:16 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Editorial Resource description framework technologies in chemistry Egon L Willighagen, Martin P Brändle Journal of Cheminformatics 2011, 3:15 (13 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract

		Methodology Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:20 (19 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Preliminary communication Linked open drug data for pharmaceutical research and development Matthias Samwald, Anja Jentzsch, Christopher Bouton, Claus Kallesøe, Egon Willighagen, Janos Hajagos, M Marshall, Eric Prud'hommeaux, Oktie Hassanzadeh, Elgar Pichler, Susie Stephens Journal of Cheminformatics 2011, 3:19 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Software AMBIT RESTful web services: an implementation of the OpenTox application programming interface Nina Jeliazkova, Vedrin Jeliazkov Journal of Cheminformatics 2011, 3:18 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Research article ChemicalTagger: A tool for semantic text-mining in chemistry Lezan Hawizy, David M Jessop, Nico Adams, Peter Murray-Rust Journal of Cheminformatics 2011, 3:17 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
		Methodology Semantic Web integration of Cheminformatics resources with the SADI framework Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:16 (16 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract
		Editorial Resource description framework technologies in chemistry Egon L Willighagen, Martin P Brändle Journal of Cheminformatics 2011, 3:15 (13 May 2011) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central \| Graphical abstract